我正在尝试运行 OpenScience_Scripts 存储库中 doDecon.sh AFNI 脚本的变体，该脚本将处理我正在分别分析的三个任务的功能性神经影像数据，但我一直遇到“3Ddeconvolve”命令的错误，提示符号和-fout未找到，致命错误。 错误代码粘贴在这里。
我尝试确保安装了所有 AFNI 软件包，并将 AFNI 设置为在后台运行，但每次尝试运行脚本时都会弹出此错误。请注意，我在装有 Linux shell 的 Windows 计算机上工作，我知道这有时会造成问题。
如果有人以前见过这个错误代码或注意到我的脚本中有任何问题，我很乐意听听他们的想法......
#!/bin/tcsh
if ( $#argv > 0 ) then
set subj = $argv[1]
else
set subj = s01
endif
3dDeconvolve -input rsem_scale.nii \
-mask mask/mask_func_sem.nii.gz \
-polort 1 \
-xout -progress \
-num_stimts 11 \
-stim_times 1 stimuli/sem.1D 'BLOCK(2,1)' \
-stim_label 1 sem \
-stim_times 2 stimuli/sem_ctrl.1D 'BLOCK(2,1)' \
-stim_label 2 sem_ctrl \
-stim_file 3 regressors/trans_x_sem_noHead_tmp.txt'[0]' -stim_base 3 -stim_label 3 trans_x_sem \
-stim_file 4 regressors/trans_y_sem_noHead_tmp.txt'[0]' -stim_base 4 -stim_label 4 trans_y_sem \
-stim_file 5 regressors/trans_z_sem_noHead_tmp.txt'[0]' -stim_base 5 -stim_label 5 trans_z_sem \
-stim_file 6 regressors/rot_x_sem_noHead_tmp.txt'[0]' -stim_base 6 -stim_label 6 rot_x_sem \
-stim_file 7 regressors/rot_y_sem_noHead_tmp.txt'[0]' -stim_base 7 -stim_label 7 rot_y_sem \
-stim_file 8 regressors/rot_z_sem_noHead_tmp.txt'[0]' -stim_base 8 -stim_label 8 rot_z_sem \
-stim_file 9 regressors/global_signal_sem_noHead_tmp.txt'[0]' -stim_base 9 -stim_label 9 global_signal_sem \
-stim_file 10 regressors/csf_sem_noHead_tmp.txt'[0]' -stim_base 10 -stim_label 10 csf_sem \
-stim_file 11 regressors/white_matter_sem_noHead_tmp.txt'[0]' -stim_base 11 -stim_label 11 white_matter_sem \
-jobs 8 \
# tells AFNI to run GLT based on label names
-gltsym 'SYM: sem -sem_ctrl' \
-glt_label 1 sem -ctrl \
-gltsym 'SYM: sem_ctrl -sem' \
-glt_label 2 ctrl -sem
-fout -tout -rout -x1D X.xmat.1D -xjpeg X.jpg \
-x1D_uncensored X.nocensor.xmat.1D \
-fitts fitts.$subj.sem \
-errts errts.${subj}.sem \
-bucket stats.$subj.sem
3dDeconvolve -input rplaus_scale.nii \
-mask mask/mask_func_plaus.nii.gz \
-polort 1 \
-xout -progress \
-num_stimts 11 \
-stim_times 1 stimuli/plaus.1D 'BLOCK(2,1)' \
-stim_label 1 plaus \
-stim_times 2 stimuli/plaus_ctrl.1D 'BLOCK(2,1)' \
-stim_label 2 plaus_ctrl \
-stim_file 3 regressors/trans_x_plaus_noHead_tmp.txt'[0]' -stim_base 3 -stim_label 3 trans_x_plaus \
-stim_file 4 regressors/trans_y_plaus_noHead_tmp.txt'[0]' -stim_base 4 -stim_label 4 trans_y_plaus \
-stim_file 5 regressors/trans_z_plaus_noHead_tmp.txt'[0]' -stim_base 5 -stim_label 5 trans_z_plaus \
-stim_file 6 regressors/rot_x_plaus_noHead_tmp.txt'[0]' -stim_base 6 -stim_label 6 rot_x_plaus \
-stim_file 7 regressors/rot_y_plaus_noHead_tmp.txt'[0]' -stim_base 7 -stim_label 7 rot_y_plaus \
-stim_file 8 regressors/rot_z_plaus_noHead_tmp.txt'[0]' -stim_base 8 -stim_label 8 rot_z_plaus \
-stim_file 9 regressors/global_signal_plaus_noHead_tmp.txt'[0]' -stim_base 9 -stim_label 9 global_signal_plaus \
-stim_file 10 regressors/csf_plaus_noHead_tmp.txt'[0]' -stim_base 10 -stim_label 10 csf_plaus \
-stim_file 11 regressors/white_matter_plaus_noHead_tmp.txt'[0]' -stim_base 11 -stim_label 11 white_matter_plaus \
-jobs 8 \
# tells AFNI to run GLT based on label names
-gltsym 'SYM: plaus -plaus_ctrl' \
-glt_label 1 plaus -ctrl \
-gltsym 'SYM: plaus_ctrl -plaus' \
-glt_label 2 ctrl -plaus \
-fout -tout -rout -x1D X.xmat.1D -xjpeg X.jpg \
-x1D_uncensored X.nocensor.xmat.1D \
-fitts fitts.$subj.plaus \
-errts errts.${subj}.plaus \
-bucket stats.$subj.plaus
3dDeconvolve -input rgram_scale.nii \
-mask mask/mask_func_gram.nii.gz \
-polort 1 \
-xout -progress \
-num_stimts 11 \
-stim_times 1 stimuli/gram.1D 'BLOCK(2,1)' \
-stim_label 1 gram \
-stim_times 2 stimuli/gram_ctrl.1D 'BLOCK(2,1)' \
-stim_label 2 gram_ctrl \
-stim_file 3 regressors/trans_x_gram_noHead_tmp.txt'[0]' -stim_base 3 -stim_label 3 trans_x_gram \
-stim_file 4 regressors/trans_y_gram_noHead_tmp.txt'[0]' -stim_base 4 -stim_label 4 trans_y_gram \
-stim_file 5 regressors/trans_z_gram_noHead_tmp.txt'[0]' -stim_base 5 -stim_label 5 trans_z_gram \
-stim_file 6 regressors/rot_x_gram_noHead_tmp.txt'[0]' -stim_base 6 -stim_label 6 rot_x_gram \
-stim_file 7 regressors/rot_y_gram_noHead_tmp.txt'[0]' -stim_base 7 -stim_label 7 rot_y_gram \
-stim_file 8 regressors/rot_z_gram_noHead_tmp.txt'[0]' -stim_base 8 -stim_label 8 rot_z_gram \
-stim_file 9 regressors/global_signal_gram_noHead_tmp.txt'[0]' -stim_base 9 -stim_label 9 global_signal_gram \
-stim_file 10 regressors/csf_gram_noHead_tmp.txt'[0]' -stim_base 10 -stim_label 10 csf_gram \
-stim_file 11 regressors/white_matter_gram_noHead_tmp.txt'[0]' -stim_base 11 -stim_label 11 white_matter_gram \
-jobs 8 \
# tells AFNI to run GLT based on label names
-gltsym 'SYM: gram -gram_ctrl' \
-glt_label 1 gram -ctrl \
-gltsym 'SYM: gram_ctrl -gram' \
-glt_label 2 ctrl -gram \
-fout -tout -rout -x1D X.xmat.1D -xjpeg X.jpg \
-x1D_uncensored X.nocensor.xmat.1D \
-fitts fitts.$subj.gram \
-errts errts.${subj}.gram \
-bucket stats.$subj.gram