我今天尝试使用pgfmolbioTeX Live 2013 中的 pdfTeX 制作色谱图。
我使用的代码是：
\documentclass{article}
\usepackage[chromatogram]{pgfmolbio}
\pagestyle{empty}
\begin{document}
\pmbchromatogram{seq.scf}
\end{document}
代码给出以下错误：
./figures-1.tex:5: Undefined control sequence.
l.5 \pmbchromatogram
{seq.scf}
我尽力按照手册页操作。但是，即使我加载了模块convert，仍然会出现相同的错误消息。我Package ifluatex Info: LuaTeX not detected.在日志中看到了。这可能是问题的根源吗？
编辑：
在阅读 Paul 的评论后，我也尝试运行该文件luatex。它给出了以下结果：
This is LuaTeX, Version beta-0.76.0-2013061817 (rev 4627)
restricted \write18 enabled.
(./figures-1.tex
! Undefined control sequence.
l.1 \documentclass
{article}
?
编辑：
这是的结果lualatex。
This is LuaTeX, Version beta-0.76.0-2013061817 (rev 4627)
restricted \write18 enabled.
(./figures-1.tex
LaTeX2e <2011/06/27>
Babel <3.9f> and hyphenation patterns for 78 languages loaded.
(/usr/local/texlive/2013/texmf-dist/tex/latex/base/article.cls
Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
(/usr/local/texlive/2013/texmf-dist/tex/latex/base/size10.clo))
(/usr/local/texlive/2013/texmf-dist/tex/lualatex/pgfmolbio/pgfmolbio.sty
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(/usr/local/texlive/2013/texmf-dist/tex/luatex/luatexbase/luatexbase-modutils.s
ty
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)
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)
(/usr/local/texlive/2013/texmf-dist/tex/luatex/luatexbase/modutils.lua))
(/usr/local/texlive/2013/texmf-dist/tex/luatex/lualibs/lualibs.lua)
! LuaTeX error ...xlive/2013/texmf-dist/tex/luatex/luatexbase/modutils.lua:57: m
odule 'pgfmolbio' not found:
no field package.preload['pgfmolbio']
[luatexbase.loader] Search failed
[kpse lua searcher] file not found: 'pgfmolbio'
[kpse C searcher] file not found: 'pgfmolbio'
stack traceback:
[C]: in function 'require'
...xlive/2013/texmf-dist/tex/luatex/luatexbase/modutils.lua:57: in function 're
quire_module'
[string "\directlua "]:1: in main chunk.
\lltxb@requirelua ...xluaescapestring {#2}" \fi )}
l.44 \fi
日志文件附于：
This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013) (format=pdflatex 2013.7.20) 29 JUL 2013 23:36
entering extended mode
\write18 enabled.
%&-line parsing enabled.
**figures-1.tex
(./figures-1.tex
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Package: kvsetkeys 2012/04/25 v1.16 Key value parser (HO)
(/usr/local/texlive/2013/texmf-dist/tex/generic/oberdiek/etexcmds.sty
Package: etexcmds 2011/02/16 v1.5 Avoid name clashes with e-TeX commands (HO)
Package etexcmds Info: Could not find \expanded.
(etexcmds) That can mean that you are not using pdfTeX 1.50 or
(etexcmds) that some package has redefined \expanded.
(etexcmds) In the latter case, load this package earlier.
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Package grfext Info: Graphics extension search list:
(grfext) [.png,.pdf,.jpg,.mps,.jpeg,.jbig2,.jb2,.PNG,.PDF,.JPG,.JPE
G,.JBIG2,.JB2,.eps]
(grfext) \AppendGraphicsExtensions on input line 452.
(/usr/local/texlive/2013/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg
File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv
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! Undefined control sequence.
l.5 \pmbchromatogram
{seq.scf}
? x
Here is how much of TeX's memory you used:
10116 strings out of 493311
198299 string characters out of 6137850
242783 words of memory out of 5000000
13376 multiletter control sequences out of 15000+600000
3640 words of font info for 14 fonts, out of 8000000 for 9000
957 hyphenation exceptions out of 8191
63i,0n,57p,456b,83s stack positions out of 5000i,500n,10000p,200000b,80000s
No pages of output.
PDF statistics:
3 PDF objects out of 1000 (max. 8388607)
0 named destinations out of 1000 (max. 500000)
1 words of extra memory for PDF output out of 10000 (max. 10000000)
答案1
显然，缺失pgfmolbio.lua是问题的一部分。但是，可以通过将pgfmolbio包中的所有文件放入.我试图编译的 tex 文件的目录中来解决。但是，应该向 Tex Live 提交错误报告。
兼容性问题已由 Wolfgang 亲自解决。此更新已反映在 CRAN 上。